Welcome to DeepSpaceDB, a comprehensive spatial transcriptomics database hosting over 1,500 samples across human and mouse tissues. Our platform integrates high-resolution spatial data with powerful analysis tools, enabling researchers to explore gene expression patterns in their biological context.

Whether you're studying tissue development, disease progression, or cellular organization, DeepSpaceDB provides the tools and data you need to unlock spatial insights in your research. Learn more about DeepSpaceDB →

Total Samples

1674

Total Spots

3.9M

Human Samples

1011

Mouse Samples

663

Latest News

  • We put our preprint about DeepSpaceDB on bioRxiv [2025 Jan 6]
  • A short article about DeepSpaceDB was published in 客観日本 (Simplified Chinese and Traditional Chinese) [2024 Dec 13]
  • A short article about DeepSpaceDB was published in JST News (Japanese) [2024 Dec 2]
  • We made DeepSpaceDB v1.0 public [2024 Sep 5]